PoplarV1, Main, Exploration, bibRecord, 001233

Proteomics analysis reveals the molecular mechanism underlying the transition from primary to secondary growth of poplar.

Identifieur interne : 001233 ( Main/Exploration ); précédent : 001232; suivant : 001234

Proteomics analysis reveals the molecular mechanism underlying the transition from primary to secondary growth of poplar.

Auteurs : Yuan Li [République populaire de Chine] ; Feng Jin [République populaire de Chine] ; Qing Chao [République populaire de Chine] ; Bai-Chen Wang [République populaire de Chine]

Source :

Journal of plant physiology [ 1618-1328 ] ; 2017.

RBID : pubmed:28284108

Descripteurs français

KwdFr :
- Biologie informatique (MeSH), Populus (croissance et développement), Populus (génétique), Populus (métabolisme), Protéines végétales (génétique), Protéines végétales (métabolisme), Protéomique (méthodes), Réaction de polymérisation en chaine en temps réel (MeSH), Régulation de l'expression des gènes végétaux (génétique).
MESH :
- croissance et développement : Populus.
- génétique : Populus, Protéines végétales, Régulation de l'expression des gènes végétaux.
- métabolisme : Populus, Protéines végétales.
- méthodes : Protéomique.
- Biologie informatique, Réaction de polymérisation en chaine en temps réel.

English descriptors

KwdEn :
- Computational Biology (MeSH), Gene Expression Regulation, Plant (genetics), Plant Proteins (genetics), Plant Proteins (metabolism), Populus (genetics), Populus (growth & development), Populus (metabolism), Proteomics (methods), Real-Time Polymerase Chain Reaction (MeSH).
MESH :
- chemical , genetics : Plant Proteins.
- genetics : Gene Expression Regulation, Plant, Populus.
- growth & development : Populus.
- chemical , metabolism : Plant Proteins, Populus.
- methods : Proteomics.
- Computational Biology, Real-Time Polymerase Chain Reaction.

Abstract

Wood is the most important natural source of energy and also provides fuel and fiber. Considering the significant role of wood, it is critical to understand how wood is formed. Integration of knowledge about wood development at the cellular and molecular levels will allow more comprehensive understanding of this complex process. In the present study, we used a comparative proteomic approach to investigate the differences in protein profiles between primary and secondary growth in young poplar stems using tandem mass tag (TMT)-labeling. More than 10,816 proteins were identified, and, among these, 3106 proteins were differentially expressed during primary to secondary growth. Proteomic data were validated using a combination of histochemical staining, enzyme activity assays, and quantitative real-time PCR. Bioinformatics analysis revealed that these differentially expressed proteins are related to various metabolic pathways, mainly including signaling, phytohormones, cell cycle, cell wall, secondary metabolism, carbohydrate and energy metabolism, and protein metabolism as well as redox and stress pathways. This large proteomics dataset will be valuable for uncovering the molecular changes occurring during the transition from primary to secondary growth. Further, it provides new and accurate information for tree breeding to modify wood properties.

DOI: 10.1016/j.jplph.2017.02.009
PubMed: 28284108

Affiliations:

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Le document en format XML

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<term>Protéines végétales (génétique)</term>
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<front><div type="abstract" xml:lang="en">Wood is the most important natural source of energy and also provides fuel and fiber. Considering the significant role of wood, it is critical to understand how wood is formed. Integration of knowledge about wood development at the cellular and molecular levels will allow more comprehensive understanding of this complex process. In the present study, we used a comparative proteomic approach to investigate the differences in protein profiles between primary and secondary growth in young poplar stems using tandem mass tag (TMT)-labeling. More than 10,816 proteins were identified, and, among these, 3106 proteins were differentially expressed during primary to secondary growth. Proteomic data were validated using a combination of histochemical staining, enzyme activity assays, and quantitative real-time PCR. Bioinformatics analysis revealed that these differentially expressed proteins are related to various metabolic pathways, mainly including signaling, phytohormones, cell cycle, cell wall, secondary metabolism, carbohydrate and energy metabolism, and protein metabolism as well as redox and stress pathways. This large proteomics dataset will be valuable for uncovering the molecular changes occurring during the transition from primary to secondary growth. Further, it provides new and accurate information for tree breeding to modify wood properties.</div>
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Proteomics analysis reveals the molecular mechanism underlying the transition from primary to secondary growth of poplar.

Proteomics analysis reveals the molecular mechanism underlying the transition from primary to secondary growth of poplar.

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

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